Arafat Rahman Oany

About

Ph.D. candidate in Biomedical Sciences at Texas A\&M University focusing on ferroptosis, nuclear receptors, and cancer therapeutics

Researcher & QC Personnel of Pharmaceutical Company.

To be updated........

  • Degree: Master
  • Email: arafatr@outlook.com
  • To be updated........

    Facts

    to be updated....

    Work Independently

    Target Oriented

    Communication Skills

    Hard-working

    Skills

    To be updatd...

    Laboratory skills

  • Polymerase Chain Reaction (PCR)
  • Genomic DNA extraction
  • Agarose gel electrophoresis
  • Plasmid DNA isolation and analysis
  • Antibiogram and cytotoxicity test
  • RFLP analysis
  • Infrared Spectroscopy (ATR)
  • UV–VIS Spectroscopy
  • Atomic Absorption Spectroscopy (AAS)
  • High Performance Liquid Chromatography (HPLC)
  • Gas chromatography (GC)
  • Phage DNA extraction
  • Pulse Field Gel Electrophoresis (PFGE)
  • Inductively Coupled Plasma - Optical Emission Spectrometer (ICP-OES)
  • Computational Biology
  • Serotyping and conjugation
  • Plant extracts bioactivity analysis
  • Bacteriophage characterization
  • Restriction digestion and dendrogram
  • ELISA analysis
  • Thin Layer Chromatography (TLC)
  • Different microbiological lab techniques
  • Resume

    To be updated.....

    Summary

    Arafat Rahman Oany

    Ph.D. candidate in Biomedical Sciences at Texas A\&M University focusing on ferroptosis, nuclear receptors, and cancer therapeutics

    Education

    Master of Science in Biotechnology and Genetic Engineering

    2014 - 2016

    Mawlana Bhashani Science and Technology University, Bangladesh

    Thesis:

    Isolation, identification and molecular characterization of Shigella flexneri specefic bacteriophages from the environmental waters in Bangladesh

    Supervised By:

    Dr. Kaiser Ali Talukder (Former PI, Enteric and Food Microbiology Laboratory, icddr,b)

    Bachelor of Science in Biotechnology and Genetic Engineering

    2010 - 2014

    Mawlana Bhashani Science and Technology University, Bangladesh

    Thesis:

    A Hypothetical Protein of Alteromonas macleodii AltDE1 (amad1_06475) Predicted to be a Cold-Shock Protein with RNA Chaperone Activity

    Supervised By:

    Dr. Shah Adil Ishtiyaq Ahmad, Assistant Professor,Mawlana Bhashani Science and Technology University, Bangladesh

    Professional Experience

    Senior executive, Quality Control

    Mar 2021 to Aug 2022

    Aristopharma Limited, Bangladesh

    • Analytical method validation, Analytical Method, and SOP preparation
    • Machine calibration
    • Incoming raw material, and vendor evaluation
    • Supervision of the water quality analysis and raw material sampling

    Senior Officer, Quality Control

    Jan 2019 to Mar 2021

    Aristopharma Limited, Bangladesh

    • Quality analysis of the raw materials
    • Machine maintenance and calibration
    • Water sample analysis and management

    Officer, Quality Control

    Nov 2016 to Jan 2019

    Aristopharma Limited, Bangladesh

  • Quality analysis of the raw materials and finished products
  • Research Experience

    Elective Research Fellow

    (National Field Experience)

    Oct 2015 to Nov 16

    Enteric and Food Microbiology Laboratory, International Centre for Diarrheal Disease Research, Bangladesh (icddr, b)

    • Research design
    • Machine maintenance
    • Sample collection, and conduct routine tests
    • Data preparation, analysis, and manuscript writing
    • Goal:

      Serotype specific bacteriophage isolation, characterization and find-out possible alternative treatment of diarrhea

    Research and Publications

    Research Interest

    Drug Designing, Cancer Biology, Bioinformatics and Molecular Biology

    Research Highlights

    Publications

  • Total number of publications:18
  • Total Citation: 335
  • i10 index: 9
  • h Index: 9
  • Total Impact Factor: 41.17

  • 01. Oany AR.; Mia, M.; Pervin, T.; Alyami, S.A.; Moni, M.A 2021. Integrative Systems Biology Approaches to Identify Potential Biomarkers and Pathways of Cervical Cancer. Journal of Personalized. Medicine., 11, 363 (PMID: 33946372) (Impact Factor: 3.508) (Link)

    02. Oany AR.; Pervin, T. and Moni, M.A., 2021. Pharmacoinformatics based elucidation and designing of potential inhibitors against Plasmodium falciparum to target importin α/β mediated nuclear importation. Infection, Genetics and Evolution, 88, p.104699. (PMID: 33385575)( (Impact Factor: 4.393) (Link)

    03. Pervin, T. and Oany AR.;, 2021. Vaccinomics approach for scheming potential epitope based peptide vaccine by targeting L-protein of Marburg virus. ,In silico Pharmacology, 9(1), pp.1 18. (Link)

    04. Oany AR.; Mia, M., Pervin, T., Junaid, M., Hosen, S.Z. and Moni, M.A., 2020. Design of novel viral attachment inhibitors of the spike glycoprotein (S) of severe acute respiratory syndrome coronavirus 2 (SARS CoV 2) through virtual screening and dynamics. ,International Journal of Antimicrobial Agents, 56(6), p.106177. (PMID: 32987103)( (Impact Factor: 15.441) (Link)

    05. Oany AR.;Pervin T, Mia M, et. Al, 2017. Vaccinomics approach for designing potential peptide vaccine by targeting ,Shigella Spp. serine protease autotransporter (SPATE) subfamily protein, SigA. ,Journal of Immunology Research.14. (PMID: 25187696)( (Impact Factor: 4.493) (Link)

    06. Hossain MU, Omar TM, Oany AR.; Kibria KK, Shibly AZ, Moniruzzaman M, Ali SR, Islam MM, 2018. Design of peptide based epitope vaccine and further binding site scrutiny led to groundswell in drug discovery against Lassa virus. 3 Biotech. Feb 1; 8(2):81. (PMID: 29430345)( (Impact Factor: 2.893) (Link)

    07. Oany AR.;Emran AA, and Jyoti TP, 2014. Design of an epitope based peptide vaccine against spike protein of human coronavirus: an in silico approach. Drug Design, Development and Therapy. 8, 1139. (PMID: 25187696) (Impact Factor: 4.319) (Link)

    08. Kibria KK, Hossain MU, Oany AR.; Ahmad SA, 2016. Novel insights on ENTH domain containing proteins in apicomplexan parasites. ,Parasitology Research. 115, 2191. (PMID: 26922178) (Impact Factor: 2.383) (Link)

    09. Hossain MU, Oany AR.; Ahmad SA, Hasan MA, Khan MA, Siddikey MA, 2016. Identification of potential inhibitor and enzyme inhibitor complex on trypanothione reductase to control Chagas disease. Computational Biology and Chemistry 65, 29. (PMID: 27744094) (Impact Factor: 3.737) (Link)

    10. Oany AR.;Hossain MU,siddikey AA, Islam R, Emran AA, 2016. A preliminary evaluation of cytotoxicity, antihyperglycemic and antinociceptive activity of Polygonum hydropiper L ethanolic leaf extracts. Clinical Phytoscience. 2, 1 6. (Link)

    11. Oany AR.; Sharmin T, Chowdhury AS, Jyoti TP, Hasan MA, 2015 . Highly conserved regions in Ebola virus RNA dependent RNA polymerase may be act as a universal novel peptide vaccine target: a computational approach." In silico Pharmacology.:3, 1 13. (PMID:26820892) (Link)

    12. Oany AR.; Jyoti TP, Ahmad SA, 2014. An in silico approach for characterization of an aminoglycoside antibiotic resistant methyltransferase protein from Pyrococcus furiosus (DSM 3638). Bioinformatics and Biology Insights 8 65 72. (PMID: 24683305) (Link)

    13. Oany AR.; Ahmad SA, Kibria KK, Hossain MU, Jyoti TP, 2014. A hypothetical protein of Alteromonas macleodii AltDE1 (amad1_06475) predicted to be a cold Shock protein with RNA chaperone activity. Gene regulation and systems biology 141. (PMID:25574135) (Link)

    14. Oany AR.; Ahmad SA, Hossain MU, Jyoti TP, 2015. Identification of highly conserved regions in L segment of Crimean Congo hemorrhagic fever virus and immunoinformatic prediction about potential novel vaccine. Advances and Applications in Bioinformatics and Chemistry: 8,1 10. (PMID: 25609983) (Link)

    15. Oany AR.; Mamun Mia, Tehmina Pervin, Nazmul Hasan,Akinori Hirashima 2018. Identification of potential drug targets and inhibitor of the pathogenic bacteria Shigella flexneri 2a through the subtractive genomic approach In Silico Pharmacology: 6,1 11. (PMID: 30607324) (Link)

    Manuscript submitted/ Ready for Submission

    Integrative bioinformatics approaches to identify novel molecular gene expression signatures and pathways of Cystic Fibrosis (CF) (Ready for Submission)


    My Photography

    Achievements

    Training and Workshop

    Name: Biosafety and Biosecurity

    Organized by: Biosafety division, ICDDR, B

    Dated 13-15 October, 2015.


    Name: Basic Biotechnology

    Organized by: National Institute of Biotechnology (NIB), Bangladesh

    Dated 24-28 November, 2013.


    Name: Medical Waste Management in Bangladesh

    Organized by: Dr. Natasha K. Griffith, Former Director, High Containment Facilities Responsible officials (RO), University of California Los Angeles, USA.

    Held in: ICDDR, B.

    Dated 24th October, 2015.


    Name: ASM Virtual Workshop on Scientific Writing and Publishing

    Organized by: Dr. Firdausi Qadri, ASM Ambassador to Bangladesh.

    Held in: ICDDR, B.

    Dated 4th August 2015.



    Conference

    Name: “Student/Postdoc Research Conference (SPRC)

    Organized by: Department of Biology, Texas A&M University, College Station, Texas, USA

    Held in: Cavalry Court, College Station, Texas, USA

    Dated 11th February 2023


    Name: Drug Discovery & Development Research in Developing Countries

    Organized by: International Centre for Genetic Engineering and Biotechnology

    Held in: Bangladesh University of Health Sciences, Bangladesh

    Dated 03-06 October, 2015.


    Name: Fourth Regional Public Health Conference

    Organized by: Bangladesh University of Health Science, in collaboration with Department of International Health, University of Oslo, Norway

    Held in: Bangladesh University of Health Sciences, Bangladesh

    Dated 02-03 March, 2014.

    Memberships

  • Member of Young Biotechnologist of Bangladesh.

  • International Society for Computational Biology (ISCB)

  • International Society for Infectious Diseases (ISID)

  • European Society of Clinical Microbiology and Infectious Diseases (ESCMID)



    Reviewer Certificates

    Peer reviewer of the few journals of Elsevier, Springer, and others.

    # Web of Science™ Peer Reviewer Profile (Link)


  • Testimonials

    To be updated.....

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    Contact

    To be updated......

    Location:

    430 Southwest Parkway, College Station, Texas-77840

    Call:

    +1 936 324 8131

    College Station

    College Station